Insertion junction: LMJ.RY0402.132435_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.132435
Chromosome:chromosome 11
Location:896247
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g467656 (1 of 9) IPR007112//IPR009009 - Expansin/pollen allergen, DPBB domain // RlpA-like double-psi beta-barrel domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTGGGCCTGGCGACTTGCGAGTTCAAT
Internal bar code:TGTGTCTGTGATGTCGACCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:65.9463
LEAP-Seq n confirming:1129
LEAP-Seq n nonconfirming:583
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAAGATTTGTGTGTGTG
Suggested primer 2:CAGCCGAGTAGTTCCCTCTG