Insertion junction: LMJ.RY0402.132541_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.132541
Chromosome:chromosome 16
Location:3166587
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g666050 CPLD49,SCD1 (1 of 4) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP); Cytochrome b6f biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATGCCCCTGCTTGCAGCAGCACTCTCA
Internal bar code:CTGGCGACTACCGTGGCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCTCCTTGTTGTCCT
Suggested primer 2:CTCGCAGAATTGGGACTAGC