Insertion junction: LMJ.RY0402.132668_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.132668
Chromosome:chromosome 12
Location:7474752
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g556100 DNAAF13,SPAG1 Sperm-associated antigen 1; (1 of 1) PF00515//PF07719//PF13414//PF13877 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Potential Monad-binding region of RPAP3 (RPAP3_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGGCAGGCGGCCAGGTGCTACGGGGG
Internal bar code:CATGACCGTGGAATGGAACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:8.8983
LEAP-Seq n confirming:147
LEAP-Seq n nonconfirming:1505
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGGCGTACATGAGGT
Suggested primer 2:GTTTGCACGCTCCCTTAGAG