Insertion junction: LMJ.RY0402.132729_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.132729
Chromosome:chromosome 17
Location:3303769
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGCCGCCACGGTTGACGACATCAAGTA
Internal bar code:CAAACAGGCTCAACCAAGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGATTTGCGGAGGACG
Suggested primer 2:GTTTGTGACCCACACACTGG