Insertion junction: LMJ.RY0402.132813_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.132813
Chromosome:chromosome 6
Location:5841063
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g287850 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTTCATAGGACTGGCAGCACTAGAGG
Internal bar code:TAGCAACTCACGGTCGTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:99.5238
LEAP-Seq n confirming:627
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAACATCAGATGCGTTCCCT
Suggested primer 2:CTCCGATAGCGTAGTCAGGC