Insertion junction: LMJ.RY0402.132873_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.132873
Chromosome:chromosome 3
Location:4932876
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAAACCCGTCAGGCGAAGTCTTTTATA
Internal bar code:TGTGCGAGATGGATCTTGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGTGTGATGGCCTGATG
Suggested primer 2:TCTAGGAAACGGCCAAAATG