Insertion junction: LMJ.RY0402.132936_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.132936
Chromosome:chromosome 12
Location:7480354
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g556100 DNAAF13,SPAG1 Sperm-associated antigen 1; (1 of 1) PF00515//PF07719//PF13414//PF13877 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Potential Monad-binding region of RPAP3 (RPAP3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTATGGCCCCGTAGAGCCTTTGGATA
Internal bar code:GATCTGCTTATGGACGATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:95.7492
LEAP-Seq n confirming:901
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAACTCATGGGCGTTCT
Suggested primer 2:GATGGTTGTGGAGGAGGAGA