Insertion junction: LMJ.RY0402.133039_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.133039
Chromosome:chromosome 17
Location:6214702
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACGCAGAGTACTTAGCAGCTATAAT
Internal bar code:TCGCAGGGTAATGTCGCCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:796
LEAP-Seq percent confirming:99.9028
LEAP-Seq n confirming:5139
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCTGGTACGTGTGGAC
Suggested primer 2:TCATGAGCACGTCGATAAGC