Insertion junction: LMJ.RY0402.133234_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.133234
Chromosome:chromosome 9
Location:4763392
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCATCCTAGCTCCAAGCTCCTACTTTG
Internal bar code:GGGTGGTCCGGTGATTATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:99.5772
LEAP-Seq n confirming:471
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGATTGACGGTGTAATG
Suggested primer 2:CCGCAGTTGCACTAGTGTGT