Insertion junction: LMJ.RY0402.133302_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.133302
Chromosome:chromosome 3
Location:8842897
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGTCCGCCACTACGCTTCCCGCATAC
Internal bar code:CATTAATATCGGTACTGAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:99.6355
LEAP-Seq n confirming:7107
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAGTTACGCCGAGCTGT
Suggested primer 2:TGAGTTCAATGGGGAGGTTC