Insertion junction: LMJ.RY0402.133398_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.133398
Chromosome:chromosome 3
Location:7435428
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTGACACTCCTCGAGGATCTCTTATT
Internal bar code:AGCATTACAACGTGTGTCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:97.0927
LEAP-Seq n confirming:4642
LEAP-Seq n nonconfirming:139
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGGCTAGGAGTCAAGGT
Suggested primer 2:GCTTGCTACATGGCTCATCA