Insertion junction: LMJ.RY0402.133435_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.133435
Chromosome:chromosome 9
Location:1341901
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g398700 CFA2,CPLD27 (1 of 1) 2.1.1.140 - (S)-coclaurine-N-methyltransferase; coclaurine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCAATAGCAGTAGTACGGAAGCCCTG
Internal bar code:TCAGAAACTTACGCAGCCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:99.888
LEAP-Seq n confirming:8921
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTGACCACCGCCTACAC
Suggested primer 2:TGGCAGCGTTGGTAGTAGTG