Insertion junction: LMJ.RY0402.133674_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.133674
Chromosome:chromosome 6
Location:3165585
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g275500 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGTAGCTGCAGACATACACAACAAACA
Internal bar code:GTTTGGTTACACATGTCCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:99.8957
LEAP-Seq n confirming:1915
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GATCGAGATCTTAGCCGTGC
Suggested primer 2:ACATCAACACTCCGGGTAGC