Insertion junction: LMJ.RY0402.133852_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.133852
Chromosome:chromosome 6
Location:3042927
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g274200 HTA42,HTA6 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATCTTTTCGCCTTTGTCACCCAGCCAG
Internal bar code:CTGGCAAATCTCACGTCTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:59.5238
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGAAGGGCAAGTACGC
Suggested primer 2:GTCACCGATGTGAGTTGGTG