Insertion junction: LMJ.RY0402.134064_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.134064
Chromosome:chromosome 16
Location:910206
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCGGAAACGCGGGAACAAACGCTGGA
Internal bar code:TGACCCGATTAAGGAGGAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:159
LEAP-Seq percent confirming:99.715
LEAP-Seq n confirming:4199
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCTAGCTGCGTACCTT
Suggested primer 2:GTGTGCTGCCTTACGTGTGT