Insertion junction: LMJ.RY0402.134209_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.134209
Chromosome:chromosome 9
Location:4684894
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396883 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGGGCTGCTAACCGGATTTGTTTCAA
Internal bar code:TATGGGCGATCGCGTTCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3
LEAP-Seq percent confirming:83.6842
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGTTGTAGGGCGGTGCT
Suggested primer 2:GCATTCGCATTCACTAGCAA