Insertion junction: LMJ.RY0402.134271_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.134271
Chromosome:chromosome 1
Location:2943613
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g017951 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATCATACAAGATTACTCCTGCCGTTCA
Internal bar code:GCCGCATAAGAGCGCCCCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:74.7885
LEAP-Seq n confirming:884
LEAP-Seq n nonconfirming:298
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTGAATGGCAAGCTAC
Suggested primer 2:GATGAGGACGACTTGGGAGA