Insertion junction: LMJ.RY0402.134304_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.134304
Chromosome:chromosome 3
Location:2074048
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g156700 FAP185,Nphp3 (1 of 2) IPR011990//IPR013026//IPR019734 - Tetratricopeptide-like helical domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Flagellar Associated Protein 185 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACGCAAGGGAATACACAGGTGGCATG
Internal bar code:TCCACGAGAATCGTTAGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:204
LEAP-Seq percent confirming:95.7212
LEAP-Seq n confirming:6510
LEAP-Seq n nonconfirming:291
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAAGGGACCCCATTTTC
Suggested primer 2:GTGGTATTCATTGTTCGGGG