Insertion junction: LMJ.RY0402.134591_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.134591
Chromosome:chromosome 15
Location:777274
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre15.g640101 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCACCCCGCGCCTTGGGAAGCCTGAC
Internal bar code:CACCCTTGTTAGGGCGACAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:68.4003
LEAP-Seq n confirming:868
LEAP-Seq n nonconfirming:401
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGTCGGTGGGTAGGTGAG
Suggested primer 2:GCTTGAGGTGAGGTTGGTGT