Insertion junction: LMJ.RY0402.134652_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.134652
Chromosome:chromosome 9
Location:2106765
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393700 MMP3 Matrix metalloproteinase; (1 of 2) IPR016517 - Peptidase M11, autolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCAGCGGTGCGGTGTCGGTGTTCAGCA
Internal bar code:CTTGTTAGCCCGCCATGCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:96.8764
LEAP-Seq n confirming:6420
LEAP-Seq n nonconfirming:207
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAACCCTGCTCGTCAAAG
Suggested primer 2:TACCTCACACTCCCACCTCC