Insertion junction: LMJ.RY0402.134772_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.134772
Chromosome:chromosome 2
Location:288953
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 3'UTR|outside_mRNA
Cre02.g075150 RPB2 (1 of 1) K03010 - DNA-directed RNA polymerase II subunit RPB2 (RPB2, POLR2B); DNA-directed RNA polymerase II, 135 kDa polypeptide 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGGACCTAGACTGGACGGCTTTATAAG
Internal bar code:TTGACGGTGTGAAGGTAAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:99.9619
LEAP-Seq n confirming:2624
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATTAGCGGTAGCATGGC
Suggested primer 2:TTCAAGTTCGACAAGGACCC