Insertion junction: LMJ.RY0402.134857_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.134857
Chromosome:chromosome 7
Location:517033
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGGGGACGTCACATTCCTCTCACGCC
Internal bar code:CGTCGTCTTCGAACGGTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:99.8499
LEAP-Seq n confirming:3990
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGGTTGAGAGTACTGCG
Suggested primer 2:CTTCTAACAGGCTTGGCGTC