Insertion junction: LMJ.RY0402.134872_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.134872
Chromosome:chromosome 17
Location:2436400
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g715700 VTC3,PPP44,PP2C5 (1 of 1) PF00481//PF07714 - Protein phosphatase 2C (PP2C) // Protein tyrosine kinase (Pkinase_Tyr); protein phosphatase 2C-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGAGGGGTTTCTCCTGCTGGCGCCCGG
Internal bar code:TTCTATGTACGGGGACGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:936
LEAP-Seq percent confirming:97.8506
LEAP-Seq n confirming:2868
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCCATAACCTTCTATCA
Suggested primer 2:TTATCGAGTATGGGTTCGCC