Insertion junction: LMJ.RY0402.134943_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.134943
Chromosome:chromosome 9
Location:4668513
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g396772 Similar to Gametolysin and Autolysin; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAATTTATAAAGACGTGTCAGCTACT
Internal bar code:GTCGGAACGCTGGGACGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:99.2971
LEAP-Seq n confirming:6357
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAAGATCACGCACCTCA
Suggested primer 2:TTCAGTAATCAACAGCCCCC