Insertion junction: LMJ.RY0402.134956_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.134956
Chromosome:chromosome 12
Location:2166520
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAATGGAGGTGGACCAGCTTTTGTATTC
Internal bar code:AGACCCTTATCGCGGGAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:666
LEAP-Seq percent confirming:98.8029
LEAP-Seq n confirming:3879
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCGGCATAAGTTGCTT
Suggested primer 2:CGGTGTGTGTGTGTGTGTGT