Insertion junction: LMJ.RY0402.135021_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135021
Chromosome:chromosome 2
Location:1571081
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g084873 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAATAAAAACTGCCGGTGGTTCATGCAC
Internal bar code:TTAGGCGGGTCGGTCAATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:99.469
LEAP-Seq n confirming:562
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCTGCGATGTGTAGAA
Suggested primer 2:GTTGACATATGGCGAGAGCA