Insertion junction: LMJ.RY0402.135149_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135149
Chromosome:chromosome 5
Location:1048030
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g246250 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCGGCTGTGCTCCAACCCGGCCTGTG
Internal bar code:GGGCGGCGGTGGGGTAAGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:0.081103
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1232
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCTTCTGTCGTTCAGTG
Suggested primer 2:CAAAGCAAAGCAACTCTCCC