Insertion junction: LMJ.RY0402.135149_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.135149
Chromosome:chromosome 5
Location:1048133
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g246250 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCAACCAGCTGCCACCATGTTTCCTC
Internal bar code:GTTCGGATTCCGGGCGGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:99.5792
LEAP-Seq n confirming:2840
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGTGTGAGAGGTTGA
Suggested primer 2:CAAAGCAAAGCAACTCTCCC