Insertion junction: LMJ.RY0402.135160_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.135160
Chromosome:chromosome 16
Location:3490477
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g674890 CGLD5B AP2-domain transcription factor; (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGGCGTGTCCAGAGCAGCAACTGGCC
Internal bar code:CATACCTGCCAGCCGACCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:980
LEAP-Seq percent confirming:98.9305
LEAP-Seq n confirming:185
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGATAAGGCTGCATTAGGGC
Suggested primer 2:CTCTTCCAAGCAGCATCTCC