Insertion junction: LMJ.RY0402.135199_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135199
Chromosome:chromosome 7
Location:1081104
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCCGAGTGGCTGGCCGCCCGCCTGCGG
Internal bar code:GGTTCGCGAAGGGCCCCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:926
LEAP-Seq percent confirming:86.6224
LEAP-Seq n confirming:4306
LEAP-Seq n nonconfirming:665
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGATACAGCTGGACAGG
Suggested primer 2:AACCAACTATCAACCGACGC