Insertion junction: LMJ.RY0402.135210_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.135210
Chromosome:chromosome 2
Location:2885156
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g094900 (1 of 1) PTHR23083//PTHR23083:SF427 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCACCTCCAGCGCGCGGCTGTACTCC
Internal bar code:CTTTTCTAATAAACTCCCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:99.182
LEAP-Seq n confirming:485
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGTGTGTGTGTGTGGG
Suggested primer 2:CAATCGCACGTATGGTATGC