Insertion junction: LMJ.RY0402.135210_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135210
Chromosome:chromosome 13
Location:1416654
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g572050 SMG1 (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1); Nonsense-mediated decay (NMD) pathway protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCGTCACTGCCAAGCCGAGCCGATGG
Internal bar code:TTCGGAGACGCGACTCACGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:96
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:142
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGAGGACAAAAGCCGTGA
Suggested primer 2:TACTGCATAGCTGCAATCGG