Insertion junction: LMJ.RY0402.135219_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.135219
Chromosome:chromosome 1
Location:5554776
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g039450 (1 of 2) PTHR34548//PTHR34548:SF2 - FAMILY NOT NAMED // PROTEIN TIC 21, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGCATGGCGCTCAAGTCCGTGGACGG
Internal bar code:AACTTAGATCCGGCTGAATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:98.6445
LEAP-Seq n confirming:2547
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTCATGACCTTGTGGTT
Suggested primer 2:ACCACCTGTAAAGCAATGCC