Insertion junction: LMJ.RY0402.135254_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.135254
Chromosome:chromosome 9
Location:3932695
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392319 VSP6 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACTCTTCCACGAATAGCTGCGTTACGGG
Internal bar code:CTAAGTAATGGTATAGGATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:807
LEAP-Seq percent confirming:99.8805
LEAP-Seq n confirming:1671
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCGCATAGAGAAGTTG
Suggested primer 2:GTGACAAGAAAGGAGCAGCC