Insertion junction: LMJ.RY0402.135271_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135271
Chromosome:chromosome 4
Location:1613232
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g213150 MAE13 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCGGCGGTGCAGGTGGGCGAGCGTGTG
Internal bar code:GGATGCGGTTTGTTTATTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:80
LEAP-Seq percent confirming:99.8631
LEAP-Seq n confirming:2188
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTACAACTTCGCTTCCT
Suggested primer 2:GAAGTAGTTTCGGCTGACGC