Insertion junction: LMJ.RY0402.135479_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135479
Chromosome:chromosome 4
Location:2387805
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g221100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAACGGGAAGCGCCCATCTGCAGCTCAT
Internal bar code:TGGCCCCCAGCCGCGTGCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCCACTAAGGTGCTGA
Suggested primer 2:CGGGTCCAACTTTGGAGTTA