Insertion junction: LMJ.RY0402.135555_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.135555
Chromosome:chromosome 7
Location:5449499
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g350500 TSV,TSV1 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF76 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCAACGCCTCGCGTTGGGTGGACGCC
Internal bar code:TCCCACGACGGTGTTCGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:99.1331
LEAP-Seq n confirming:3888
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAAGCTGGAGTCCTGA
Suggested primer 2:TGCAGCATCTTCTCCACAAC