Insertion junction: LMJ.RY0402.135555_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.135555
Chromosome:chromosome 7
Location:5449501
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g350500 TSV,TSV1 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF76 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGACCAGCAGAGCACCACGAGCCAACC
Internal bar code:GATTTCACCGTGTTACGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:99.2126
LEAP-Seq n confirming:252
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAAGCTGGAGTCCTGA
Suggested primer 2:TGCAGCATCTTCTCCACAAC