Insertion junction: LMJ.RY0402.135891_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.135891
Chromosome:chromosome 10
Location:475821
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g421000 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATCGCTGTGTCTCTGTGTGGCTGTGTA
Internal bar code:ACCCTCGGAGTGGTCAGCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:761
LEAP-Seq percent confirming:98.6618
LEAP-Seq n confirming:1622
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGTGTGTGTATTTCCGT
Suggested primer 2:GATATCCTCACCCAGCCTGA