Insertion junction: LMJ.RY0402.135977_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.135977
Chromosome:chromosome 12
Location:299887
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g485600 SNRK2M (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGGAAGCGTTTCGCCGGCGAACTGGGT
Internal bar code:ACCGTTTTTGGCGAGCTCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:98.3631
LEAP-Seq n confirming:1983
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTTGCGTGGTCAGTACA
Suggested primer 2:GGTCAGGGTCATCTACGCAT