Insertion junction: LMJ.RY0402.135980_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.135980
Chromosome:scaffold 19
Location:152588
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGGTGCACAGGGCGCGAGGGCAGGAA
Internal bar code:TTGGATGCTAGCAATGGTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAACAGCTGCAGAGCCT
Suggested primer 2:GTGGTTTTAGCGGTCTGAGC