Insertion junction: LMJ.RY0402.136417_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.136417
Chromosome:chromosome_9
Location:3271018
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre09.g387986 antisense 3'UTR|outside_mRNA
Cre09.g388023 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):AGACACCTACACCGCGACTACACAAGCACG
Internal bar code:TCGCGTCACAGACTGACAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:94.3284
LEAP-Seq n confirming:316
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACACTGGCAGAACTGGA
Suggested primer 2:CATATGCGTCACAACTGCCT