Insertion junction: LMJ.RY0402.136438_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.136438
Chromosome:chromosome 3
Location:1297882
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g150350 CPLD70 Conserved in the Plant Lineage and Diatoms; (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAAGCACCTGCAGCGAGGCGATTTGCAA
Internal bar code:ACACTCGCGGGCCACGCATTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:96.0766
LEAP-Seq n confirming:4114
LEAP-Seq n nonconfirming:168
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGGCAGGTAGGATGTT
Suggested primer 2:CCTGTACCTGCCGTACCTGT