Insertion junction: LMJ.RY0402.136671_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.136671
Chromosome:chromosome 5
Location:911237
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g247300 (1 of 1) PF13432//PF13489 - Tetratricopeptide repeat (TPR_16) // Methyltransferase domain (Methyltransf_23) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTGTGTTTGCACGGCCATTGGTTTGA
Internal bar code:TAAAGTGCAGACGGTTCATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:97.9433
LEAP-Seq n confirming:1381
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGTGTGTGTATGTGTGT
Suggested primer 2:GGGAGGATCATGTGGAGCTA