Insertion junction: LMJ.RY0402.136770_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.136770
Chromosome:scaffold 18
Location:154727
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre18.g749197 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTTCATGGGACACTGTGGGACACTCA
Internal bar code:CACTGGAGATGACGTAGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:419
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGATACCCACCATTTTACCG
Suggested primer 2:GCACTTCCTCCAGTTTCTGC