Insertion junction: LMJ.RY0402.136857_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.136857
Chromosome:chromosome 9
Location:2589830
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGCCAATCGGTCAACCGCCGCGGCCA
Internal bar code:GATTGAATTTTGCCCCCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:994
LEAP-Seq percent confirming:99.61
LEAP-Seq n confirming:12005
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCAAGTGACCTCCGTC
Suggested primer 2:CTGATGACAACATCCGCAAG