Insertion junction: LMJ.RY0402.136982_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.136982
Chromosome:chromosome 11
Location:2779452
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g477400 CYG43 (1 of 1) PF00072//PF00211//PF02518 - Response regulator receiver domain (Response_reg) // Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c); Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGCTCCTATTCGGAAGAGCACTGATA
Internal bar code:ACTAGGCGGGTTGGGGCTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:55.1821
LEAP-Seq n confirming:197
LEAP-Seq n nonconfirming:160
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGAGACAGGGGATAGCA
Suggested primer 2:GAGGGGTTTGCCACAAGTAA