Insertion junction: LMJ.RY0402.137055_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.137055
Chromosome:chromosome 12
Location:7441544
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g556500 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAATGCTCACTTCGGCGCAGCTCCCGG
Internal bar code:CGAAGCGGAATACTTCTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:99.5807
LEAP-Seq n confirming:475
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGGTCAAACCTTAGCG
Suggested primer 2:TTGTTGTGAGAAGGGCTGTG