Insertion junction: LMJ.RY0402.137204_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.137204
Chromosome:chromosome 3
Location:8480488
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200431 (1 of 1) IPR001356//IPR009057//IPR023214 - Homeobox domain // Homeodomain-like // HAD-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGTGTAATGCACATATCTTGCTCGTAA
Internal bar code:AAGGACAGTGTCCCGGAGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:369
LEAP-Seq percent confirming:86.2706
LEAP-Seq n confirming:25323
LEAP-Seq n nonconfirming:4030
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAAAGCGTTGTTTGTT
Suggested primer 2:CGGAGAAGATGGGCATTAAA