Insertion junction: LMJ.RY0402.137384_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.137384
Chromosome:chromosome 7
Location:4165816
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g342450 SEE3 Putative splicing endonuclease positive effector; (1 of 3) K10706 - senataxin [EC:3.6.4.-] (SETX, ALS4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACGGCCGGCGGTGGTGGATCTGACCCT
Internal bar code:GCGTTCCGGGATGCATCGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:59.4789
LEAP-Seq n confirming:662
LEAP-Seq n nonconfirming:451
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAGCACTAGGAGCAGC
Suggested primer 2:GGCTCGTTGGAACTGATGAT